Class: AIRR-seq Run (AIRRRun)

A record representing an AIRR-seq run.

 classDiagram
    class AIRRRun
    click AIRRRun href "../AIRRRun/"
      AIRRRun : nucleic_acid_processing





        AIRRRun --> "1" NucleicAcidProcessing : nucleic_acid_processing
        click NucleicAcidProcessing href "../NucleicAcidProcessing/"



      AIRRRun : sequencing_run





        AIRRRun --> "0..1 _recommended_" SequencingRun : sequencing_run
        click SequencingRun href "../SequencingRun/"

Slots

Name	Cardinality and Range	Description	Inheritance
nucleic_acid_processing	1 NucleicAcidProcessing	Procedures used to prepare nucleic acid libraries for sequencing	direct
sequencing_run	0..1 recommended SequencingRun	Metadata about the sequencing experiment	direct

Usages

used by	used in	type	used
AIRRAssay	airr_runs	range	AIRRRun

Identifier and Mapping Information

Schema Source

from schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema

Mappings

Mapping Type	Mapped Value
self	nfdi4immuno:AIRRRun
native	nfdi4immuno:AIRRRun

LinkML Source

Direct

name: AIRRRun
description: A record representing an AIRR-seq run.
title: AIRR-seq Run
from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
slots:
- nucleic_acid_processing
- sequencing_run

Induced

name: AIRRRun
description: A record representing an AIRR-seq run.
title: AIRR-seq Run
from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
attributes:
  nucleic_acid_processing:
    name: nucleic_acid_processing
    description: Procedures used to prepare nucleic acid libraries for sequencing.
    title: Nucleic Acid Processing
    from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
    rank: 1000
    alias: nucleic_acid_processing
    owner: AIRRRun
    domain_of:
    - AIRRRun
    range: NucleicAcidProcessing
    required: true
    pattern: ^.+$
  sequencing_run:
    name: sequencing_run
    description: Metadata about the sequencing experiment.
    title: Sequencing Run
    from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
    rank: 1000
    alias: sequencing_run
    owner: AIRRRun
    domain_of:
    - AIRRRun
    range: SequencingRun
    recommended: true