Class: Antibody (Antibody)

Information about an antibody used in a cytometry staining panel.

 classDiagram
    class Antibody
    click Antibody href "../Antibody/"
      Antibody : antibody_registry

      Antibody : clone

      Antibody : conjugate

      Antibody : dilution

      Antibody : manufacturer

      Antibody : name

Slots

Name	Cardinality and Range	Description	Inheritance
name	1 String	The name of the antibody or reagent	direct
clone	1 String	The clone of the antibody	direct
antibody_registry	0..1 recommended String	A reference to an entry in an antibody registry	direct
dilution	0..1 String	The dilution used for the antibody	direct
manufacturer	0..1 String	The manufacturer of the antibody or instrument	direct
conjugate	1 String	The conjugate (e	direct

Usages

used by	used in	type	used
StainingPanel	primary_antibody	range	Antibody
StainingPanel	secondary_antibody	range	Antibody

Identifier and Mapping Information

Schema Source

from schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema

Mappings

Mapping Type	Mapped Value
self	nfdi4immuno:Antibody
native	nfdi4immuno:Antibody

LinkML Source

Direct

name: Antibody
description: Information about an antibody used in a cytometry staining panel.
title: Antibody
from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
slots:
- name
- clone
- antibody_registry
- dilution
- manufacturer
- conjugate
slot_usage:
  name:
    name: name
    description: The name of the antibody or reagent.
    examples:
    - value: APC anti-mouse CD4
    required: true
    pattern: ^.+$

Induced

name: Antibody
description: Information about an antibody used in a cytometry staining panel.
title: Antibody
from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
slot_usage:
  name:
    name: name
    description: The name of the antibody or reagent.
    examples:
    - value: APC anti-mouse CD4
    required: true
    pattern: ^.+$
attributes:
  name:
    name: name
    description: The name of the antibody or reagent.
    title: Name
    examples:
    - value: APC anti-mouse CD4
    from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
    rank: 1000
    alias: name
    owner: Antibody
    domain_of:
    - Antibody
    - Contributor
    - CellCultureSubject
    range: string
    required: true
    pattern: ^.+$
  clone:
    name: clone
    description: The clone of the antibody.
    title: Clone
    examples:
    - value: GK1.5
    from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
    rank: 1000
    alias: clone
    owner: Antibody
    domain_of:
    - Antibody
    range: string
    required: true
    pattern: ^.+$
  antibody_registry:
    name: antibody_registry
    description: A reference to an entry in an antibody registry.
    title: Antibody Registry
    examples:
    - value: '{''key'': ''antibodyregistry:2616622'', ''term'': ''PE anti-human CD4''}'
      description: An entry in the antibody registry for anti-human CD4 PE.
    from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
    rank: 1000
    alias: antibody_registry
    owner: Antibody
    domain_of:
    - Antibody
    range: string
    recommended: true
  dilution:
    name: dilution
    description: The dilution used for the antibody.
    title: Dilution
    examples:
    - value: 1:200
    from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
    rank: 1000
    alias: dilution
    owner: Antibody
    domain_of:
    - Antibody
    range: string
  manufacturer:
    name: manufacturer
    description: The manufacturer of the antibody or instrument.
    title: Manufacturer
    examples:
    - value: BioLegend
    - value: BD Biosciences
    from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
    rank: 1000
    alias: manufacturer
    owner: Antibody
    domain_of:
    - Antibody
    - InstrumentInformation
    range: string
  conjugate:
    name: conjugate
    description: The conjugate (e.g., fluorochrome, metal, biotin) attached to the
      antibody.
    title: Conjugate
    examples:
    - value: APC
    from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
    rank: 1000
    alias: conjugate
    owner: Antibody
    domain_of:
    - Antibody
    range: string
    required: true
    pattern: ^.+$