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Class: Cytometry experiment (CytometryExperiment)

A record representing a cytometry experiment.

URI: nfdi4immuno:CytometryExperiment

 classDiagram
    class CytometryExperiment
    click CytometryExperiment href "../CytometryExperiment/"
      CytometryExperiment : sample_id

      CytometryExperiment : staining_panels





        CytometryExperiment --> "1..*" StainingPanel : staining_panels
        click StainingPanel href "../StainingPanel/"



Slots

Name Cardinality and Range Description Inheritance
sample_id 1
String
The user defined sample ID used to associate samples with the sample event direct
staining_panels 1..*
StainingPanel
The methods and reagents used in a cytometry panel direct

Identifier and Mapping Information

Schema Source

  • from schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema

Mappings

Mapping Type Mapped Value
self nfdi4immuno:CytometryExperiment
native nfdi4immuno:CytometryExperiment

LinkML Source

Direct

name: CytometryExperiment
description: A record representing a cytometry experiment.
title: Cytometry experiment
from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
slots:
- sample_id
- staining_panels

Induced

name: CytometryExperiment
description: A record representing a cytometry experiment.
title: Cytometry experiment
from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
attributes:
  sample_id:
    name: sample_id
    description: 'The user defined sample ID used to associate samples with the sample
      event. Must be unique within the study.

      '
    title: Sample ID
    examples:
    - value: MH031_v01
    from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
    rank: 1000
    is_a: abstract_id
    identifier: true
    alias: sample_id
    owner: CytometryExperiment
    domain_of:
    - AIRRAssay
    - CytometryExperiment
    - DataFile
    - Sample
    range: string
    required: true
    pattern: ^.+$
  staining_panels:
    name: staining_panels
    description: The methods and reagents used in a cytometry panel.
    title: Cytometry panel and methods
    from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
    rank: 1000
    alias: staining_panels
    owner: CytometryExperiment
    domain_of:
    - CytometryExperiment
    range: StainingPanel
    required: true
    multivalued: true
    minimum_cardinality: 1