Class: Instrument Information (InstrumentInformation)

Information about the instrument used in a cytometry experiment.

 classDiagram
    class InstrumentInformation
    click InstrumentInformation href "../InstrumentInformation/"
      InstrumentInformation : manufacturer

      InstrumentInformation : model

      InstrumentInformation : number_of_lasers

      InstrumentInformation : optical_configurations





        InstrumentInformation --> "*" OpticalConfiguration : optical_configurations
        click OpticalConfiguration href "../OpticalConfiguration/"

Slots

Name	Cardinality and Range	Description	Inheritance
manufacturer	0..1 String	The manufacturer of the antibody or instrument	direct
model	1 String	Instrument model shall be titled	direct
number_of_lasers	0..1 recommended Integer	The number of lasers in the flow cytometer	direct
optical_configurations	* OpticalConfiguration	The set of optical configurations used by the instrument, including informat...	direct

Usages

used by	used in	type	used
StainingPanel	instrument_information	range	InstrumentInformation

Identifier and Mapping Information

Schema Source

from schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema

Mappings

Mapping Type	Mapped Value
self	nfdi4immuno:InstrumentInformation
native	nfdi4immuno:InstrumentInformation

LinkML Source

Direct

name: InstrumentInformation
description: Information about the instrument used in a cytometry experiment.
title: Instrument Information
from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
slots:
- manufacturer
- model
- number_of_lasers
- optical_configurations

Induced

name: InstrumentInformation
description: Information about the instrument used in a cytometry experiment.
title: Instrument Information
from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
attributes:
  manufacturer:
    name: manufacturer
    description: The manufacturer of the antibody or instrument.
    title: Manufacturer
    examples:
    - value: BioLegend
    - value: BD Biosciences
    from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
    rank: 1000
    alias: manufacturer
    owner: InstrumentInformation
    domain_of:
    - Antibody
    - InstrumentInformation
    range: string
  model:
    name: model
    description: Instrument model shall be titled.
    title: Model
    examples:
    - value: FACSymphony A3
    from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
    rank: 1000
    alias: model
    owner: InstrumentInformation
    domain_of:
    - InstrumentInformation
    range: string
    required: true
    pattern: ^.+$
  number_of_lasers:
    name: number_of_lasers
    description: The number of lasers in the flow cytometer.
    title: Number of lasers
    examples:
    - value: '5'
    from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
    rank: 1000
    alias: number_of_lasers
    owner: InstrumentInformation
    domain_of:
    - InstrumentInformation
    range: integer
    recommended: true
  optical_configurations:
    name: optical_configurations
    description: 'The set of optical configurations used by the instrument,  including
      information about lasers, detectors, and bandpass filters.

      '
    title: Optical Configurations
    examples:
    - value: '[{"wavelength": "355 nm/UV", "power": "60 mW", "detector_name": "UVC",
        "bandpass": "379/28"}]'
    - value: '[{"wavelength": "405 nm/Violet", "power": "100 mW", "detector_name":
        "V450", "bandpass": "450/50"}]'
    from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
    rank: 1000
    alias: optical_configurations
    owner: InstrumentInformation
    domain_of:
    - InstrumentInformation
    range: OpticalConfiguration
    multivalued: true