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Slot: HLA genotype (hlas)

The HLA object.

URI: nfdi4immuno:hlas Alias: hlas

Applicable Classes

Name Description Modifies Slot
HumanSubject A human subject in a study no

Properties

Examples

Value
'[{"gene": {"key": "MRO:0000046", "term": "HLA-A gene"}, "allele": "02", "protein": "101", "synonymous_variant": "01", "noncoding_variant": "02", "expression_level": "N"}]'

Identifier and Mapping Information

Schema Source

  • from schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema

Mappings

Mapping Type Mapped Value
self nfdi4immuno:hlas
native nfdi4immuno:hlas

LinkML Source

name: hlas
description: The HLA object.
title: HLA genotype
examples:
- value: '''[{"gene": {"key": "MRO:0000046", "term": "HLA-A gene"}, "allele": "02",
    "protein": "101", "synonymous_variant": "01", "noncoding_variant": "02", "expression_level":
    "N"}]''

    '
  description: HLA-A*02:101:01:02N.
from_schema: https://codebase.helmholtz.cloud/nfdi4immuno/portal-infra/metadata_schema
rank: 1000
alias: hlas
domain_of:
- HumanSubject
range: HLAGenotype
multivalued: true